2026-06-15 15:09:25,650 Running on GPU
2026-06-15 15:09:25,826 Found 8 citations for tools or databases
2026-06-15 15:09:26,120 Query 1/1: test_conf_af_temp_smallmsa_63410 (length 554)
2026-06-15 15:09:32,385 Sequence 0 found templates: ['7zh0_A', '7zh0_A', '7zh0_A', '7zh0_A']
2026-06-15 15:09:36,179 Setting max_seq=16, max_extra_seq=32
2026-06-15 15:11:15,396 alphafold2_ptm_model_1_seed_000 recycle=0 pLDDT=82.6 pTM=0.833
2026-06-15 15:12:28,080 alphafold2_ptm_model_1_seed_000 recycle=1 pLDDT=82.8 pTM=0.847 tol=0.777
2026-06-15 15:13:03,709 alphafold2_ptm_model_1_seed_000 recycle=2 pLDDT=83.1 pTM=0.847 tol=0.983
2026-06-15 15:13:38,229 alphafold2_ptm_model_1_seed_000 recycle=3 pLDDT=82.3 pTM=0.834 tol=0.868
2026-06-15 15:13:38,231 alphafold2_ptm_model_1_seed_000 took 221.6s (3 recycles)
2026-06-15 15:14:13,870 alphafold2_ptm_model_2_seed_000 recycle=0 pLDDT=81.7 pTM=0.832
2026-06-15 15:14:49,394 alphafold2_ptm_model_2_seed_000 recycle=1 pLDDT=82.8 pTM=0.841 tol=0.967
2026-06-15 15:15:24,553 alphafold2_ptm_model_2_seed_000 recycle=2 pLDDT=82.8 pTM=0.843 tol=0.508
2026-06-15 15:15:59,852 alphafold2_ptm_model_2_seed_000 recycle=3 pLDDT=82.6 pTM=0.839 tol=2.63
2026-06-15 15:15:59,853 alphafold2_ptm_model_2_seed_000 took 141.3s (3 recycles)
2026-06-15 15:16:55,717 alphafold2_ptm_model_3_seed_000 recycle=0 pLDDT=56.8 pTM=0.582
2026-06-15 15:17:51,644 alphafold2_ptm_model_3_seed_000 recycle=1 pLDDT=73.4 pTM=0.74 tol=5.9
2026-06-15 15:18:24,076 alphafold2_ptm_model_3_seed_000 recycle=2 pLDDT=77.5 pTM=0.76 tol=2.37
2026-06-15 15:18:55,704 alphafold2_ptm_model_3_seed_000 recycle=3 pLDDT=75.4 pTM=0.73 tol=1.12
2026-06-15 15:18:55,706 alphafold2_ptm_model_3_seed_000 took 175.4s (3 recycles)
2026-06-15 15:19:28,156 alphafold2_ptm_model_4_seed_000 recycle=0 pLDDT=68.8 pTM=0.707
2026-06-15 15:20:00,233 alphafold2_ptm_model_4_seed_000 recycle=1 pLDDT=80.4 pTM=0.793 tol=3.8
2026-06-15 15:20:32,026 alphafold2_ptm_model_4_seed_000 recycle=2 pLDDT=81.9 pTM=0.8 tol=0.927
2026-06-15 15:21:04,200 alphafold2_ptm_model_4_seed_000 recycle=3 pLDDT=82.1 pTM=0.799 tol=1.02
2026-06-15 15:21:04,201 alphafold2_ptm_model_4_seed_000 took 128.2s (3 recycles)
2026-06-15 15:21:36,487 alphafold2_ptm_model_5_seed_000 recycle=0 pLDDT=72.9 pTM=0.739
2026-06-15 15:22:08,452 alphafold2_ptm_model_5_seed_000 recycle=1 pLDDT=81.6 pTM=0.818 tol=2.01
2026-06-15 15:22:40,582 alphafold2_ptm_model_5_seed_000 recycle=2 pLDDT=81.9 pTM=0.816 tol=1.4
2026-06-15 15:23:12,554 alphafold2_ptm_model_5_seed_000 recycle=3 pLDDT=82.6 pTM=0.809 tol=0.571
2026-06-15 15:23:12,556 alphafold2_ptm_model_5_seed_000 took 128.1s (3 recycles)
2026-06-15 15:23:12,869 reranking models by 'plddt' metric
2026-06-15 15:23:12,870 rank_001_alphafold2_ptm_model_5_seed_000 pLDDT=82.6 pTM=0.809
2026-06-15 15:23:12,870 rank_002_alphafold2_ptm_model_2_seed_000 pLDDT=82.6 pTM=0.839
2026-06-15 15:23:12,871 rank_003_alphafold2_ptm_model_1_seed_000 pLDDT=82.3 pTM=0.834
2026-06-15 15:23:12,871 rank_004_alphafold2_ptm_model_4_seed_000 pLDDT=82.1 pTM=0.799
2026-06-15 15:23:12,871 rank_005_alphafold2_ptm_model_3_seed_000 pLDDT=75.4 pTM=0.73
2026-06-15 15:23:14,936 Done
